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UK Health Security Agency

About
The UK Health Security Agency (UKHSA) will be responsible for planning, preventing and responding to external health threats, and providing intellectual, scientific and operational leadership at national and local level, as well as on the global stage. UKHSA will ensure the nation can respond quickly and at greater scale to deal with pandemics and future threats.
Contact
- Address
- 10 South Colonnade
- London
- E14 4PU
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Principal Scientist (Epidemiology)
Accepting applications until: 31-Aug-2025 23:59
Vacancy status: Open
Accepting applications until: 31-Aug-2025 23:59
Key details
Location
- Site
- Canary Wharf or Colindale
- Town
- Canary Wharf or Colindale
- Postcode
- E14 4PU
- Major / Minor Region
- London
Contract type & working pattern
- Contract
- Fixed term: 24 months (FTC for 2 years)
- Hours
- Full time
- Part time
- Job share
- Flexible working
Salary
- Salary
- £58,589 - £68,344 Per annum, Pro Rata
- Salary period
- Yearly
- Grade
- (Civil Service: Grade 7)
Specialty
- Main area
- Science
The United Kingdom Health Security Agency (UKHSA) is a system leader for health security; taking action internationally to strengthen global health security, providing trusted advice to government and the public and reducing inequalities in the way different communities experience and are impacted by infectious disease, environmental hazards, and other threats to health.
UKHSA’s remit, as an agency with a global-to-local reach, is to protect the health of the nation from infectious diseases and other external threats to health. As the nation’s expert national health security agency UKHSA will:
- Prevent: anticipate threats to health and help build the nation’s readiness, defences and health security
- Detect: use cutting edge environmental and biological surveillance to proactively detect and monitor infectious diseases and threats to health
- Analyse: use world-class science and data analytics to assess and continually monitor threats to health, identifying how best to control and mitigate the risks
- Respond: take rapid, collaborative and effective actions nationally and locally to mitigate threats to health when they materialise
- Lead: lead strong and sustainable global, national, regional and local partnerships designed to save lives, protect the nation from public health threats and reduce inequalities.
Job overview
This post is a senior role in the TARZET division, enabling the team to deliver cutting edge analysis in support of public health decision making, specifically with regard to the metagenomics Surveillance Collaboration and Analysis Programme (mSCAPE), a collaborative programme piloting the use of metagenomic data for public health surveillance and pathogen analysis.
The post holder will take a leading role in providing and developing national surveillance of pathogens identified from metagenomic data, developing guidance and leading research studies. The role will involve working in a matrix team environment to provide scientific support to the analysis, operation, and development of metagenomic surveillance systems including development of methodology and directing changes to data capture systems in liaison with system architects and software developers. The role may involve day-to-day management of scientific, technical and information staff.
The post-holder will sit in the Acute Respiratory Infections unit, whose functions include horizon scanning for respiratory pathogens, as well as surveillance and guidance for avian influenza, MERS-CoV, Legionella spp and Mycoplasma pneumoniae. They will also work in an integrated way with other teams in the TARZET division (TB, Acute Respiratory, Emerging Infections and Zoonoses and Travel Health) and the Genomics Public Health Analysis team (GPHA) within the Emerging and Epidemic Infections Directorate.
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Surveillance, Epidemiology & Public Health:
- Lead and manage the design, development, and continuous improvement of metagenomic pilot surveillance systems as required.
- Conduct complex statistical and epidemiological analyses of metagenomic and other pathogen data, as required, drawn from a variety of surveillance sources. Provide expert technical advice and assistance to public health and clinical practitioners on the design, maintenance, analysis and interpretation of databases.
- Provide expert advice in response to ad hoc enquiries from Government agencies, public health practitioners, academics, media, commercial organisations and members of the public.
- Develop methodologies to ensure emerging threats are recognized in a timely manner by the analysis and interpretation of often complex data from a variety of sources to understand the public health significance of the potential risk. You may be required to provide epidemiological support to incidents or outbreaks. Ensure the scientific validity and evidence-base of risk assessments, and that findings are communicated to the relevant stakeholders nationally and internationally through situation reports and briefing notes.
Working for our organisation
We pride ourselves as being an employer of choice, where Everyone Matters promoting equality of opportunity to actively encourage applications from everyone, including groups currently underrepresented in our workforce. UKHSA ethos is to be an inclusive organisation for all our staff and stakeholders. To create, nurture and sustain an inclusive culture, where differences drive innovative solutions to meet the needs of our workforce and wider communities. We do this through celebrating and protecting differences by removing barriers and promoting equity and equality of opportunity for all. Please visit our careers site for more information https://gov.uk/ukhsa/careers
Detailed job description and main responsibilities
Main duties and responsibilities continued:
- Identify requirements for development of specialist advice on the epidemiological aspects of metagenomic analysis, by contributing to the development of guidance, designing data collection systems, interpreting epidemiological data, conducting statistical analyses, and contributing to scientific publications.
- Manage scientific and administrative staff in the maintenance, development, statistical analysis, quality outputs and reporting from datasets. Undertake periodic evaluation of surveillance systems including stakeholder engagement exercises.
Research:
- Design analytical strategies and supervise complex statistical analyses of research datasets for the production of project reports, papers for peer reviewed journals and conference presentations.
- Initiate collaborative projects within UKHSA and external collaborators to address metagenomic research questions. This may also include taking a lead on research proposals for externally funded projects and provision of expert advice to academic units and other agencies involved in collaborative epidemiological and microbiological studies.
Management and Planning:
- Work alongside other members of the TARZET division on:
a. the business planning process and the development of surveillance/research, communication, training strategies etc
b. Compare, analyse and interpret highly complex options for running projects identified as key public health priorities, and communicate this information across organisations and key stakeholders
c. Budget responsibility for section led grants
d. Selection and recruitment of staff, including, shortlisting applicants and interviewing candidates selected for interview
e. Staff management responsibilities to be agreed with line manager
f. Being responsible for developing quality control processes, participating in audits and ensuring resilience through maintaining Standard Operating Procedures and business continuity planning
g. Being responsible for ensuring their team’s work complies to UKHSA standards and governance requirements including maintaining confidentiality and security of surveillance information
h. Development of business cases to support system developments: this may include undertaking relevant procurement requirements and management of supplier relationships - Deputising for other members of the mSCAPE programme team as required.
Publications and presentations:
- Plan and oversee the development of epidemiological outputs including outward facing publications such as annual reports, web pages, writing of scientific papers for publication in peer reviewed journals and manage junior scientific and administrative colleagues in the development of manuscripts
- Represent the programme on expert committees, national and local incident control teams, national/international meetings and conferences.
Teaching and Training:
- Contribute to the training for new members of staff on the epidemiology and surveillance of communicable disease
- Participate in wider scientific activities to maintain professional standards including peer review of manuscripts.
Professional Development
Identify, discuss, and action own professional performance and training / development needs with your line manager through appraisal / individual development plan. Attending internal / external training events
- Participate in all mandatory training as required, i.e., fire safety, information governance and all other mandatory training.
Key Working Relationships
The post holder will develop working relationships and communicate regularly with a wide range of individuals, clinical and non-clinical, internal and external to UKHSA. This will include:
• Medical, scientific and administrative colleagues working within the mSCAPE programme and TARZET Division
• Staff in other departments of UKHSA, especially colleagues in Regional and reference Laboratories and (CDO) Chief Data Officer Group.
• Government Departments including Department of Health and Social Care, NHS England and NHS Improvement, NHS Digital; Devolved Administrations
• Other clinical, public, infection control, scientific and academic staff in national, regional and local institutions in and outside the UK
• Voluntary and statutory sector agencies
Essential role criteria:
- Higher degree in epidemiology/ public health/ microbiology or equivalent experience working in public health, academia or laboratory sciences
Training in research methods, infectious disease epidemiology, surveillance, prevention and/or public health - Knowledge and work experience of communicable disease epidemiology, surveillance and prevention including healthcare associated infection and/or antimicrobial resistance and/or antimicrobial prescribing
- Broad understanding of and experience of health care systems, public health and the communicable disease function in the UK
- Strong statistical analysis of large and complex datasets, including knowledge and experience with R or Python
- Writing research protocols, grant applications and scientific reports
- Preparing and reviewing standard operating procedures
- Able to work effectively in a multi-disciplinary team and motivate and encourage team members
- Ability to make decisions autonomously, when required, on difficult issues including problem solving, working to tight and often changing timescales
- Communicate ideas and methods clearly and succinctly
Desirable role criteria:
- Creating, validating and managing large databases and datasets
- Presenting scientific papers at national and international meetings and conferences and proven peer review publication record
- Experience of working within the NHS or other health related sectors
- Managing and leading scientific and technical staff including working under pressure and to tight deadlines
- Liaising with a wide range of external collaborators including health service and academic professionals
- Maintaining required levels of confidentiality
Selection Process Details:
This vacancy will be assessed using a competency-based framework which will assess your qualifications, knowledge and experience and / or skills and abilities outlined in the essential criteria.
Stage 1: Application & Sift
You will be required to complete an application form. You will be assessed on the listed (9) essential criteria, and this will be in the form of a:
- Application form (‘Employer/ Activity history’ section on the application)
- 1000 word supporting statement.
This should outline how your skills, experience, and knowledge, provide evidence of your suitability for the role, with reference to the essential criteria.
The Application form and supporting statement will be marked together.
Longlisting:
In the event of a large number of applications we will longlist into 3 piles of:
- Meets all essential criteria
- Meets some essential criteria
- Meets no essential criteria
The following will be taken through to the next stage:
- Meets all essential criteria
- Meets some essential criteria
Shortlisting:
In the event of a large number of applications we will shortlist on the following:
- Higher degree in epidemiology/ public health/ microbiology or equivalent experience working in public health, academia or laboratory sciences
- Training in research methods, infectious disease epidemiology, surveillance, prevention and/or public health
- Knowledge and work experience of communicable disease epidemiology, surveillance and prevention including healthcare associated infection and/or antimicrobial resistance and/or antimicrobial prescribing
Desirable criteria may be used in the event of a large number of applications / large amount of successful candidates.
If you are successful at this stage, you will progress to interview & assessment.
Please do not exceed 1000 words. We will not consider any words over and above this number.
Feedback will not be provided at this stage.
Please note you will not be able to upload your CV. You must complete the application form in as much detail as possible. Please do not email us your CV.
Stage 2: Interview (competency based)
You will be invited to a (single) remote interview.
Knowledge, experience, skills & abilities will be tested at interview
You will be asked to prepare and present a 5-minute presentation at the start of your interview. The subject of this will be sent to you prior to interview.
Interviews will be held week commencing 8th September. Please note, these dates are subject to change.
Once this job has closed, the job advert will no longer be available. You may want to save a copy for your records.
Eligibility Criteria - External
Open to all external applicants (anyone) from outside the Civil Service (including by definition internal applicants).
Location
This role is being offered as hybrid working based at our Core HQ in Canary Wharf Or our Scientific Campus in Colindale.
We offer great flexible working opportunities at UKHSA and operate using a hybrid working model where business needs allow. This provides us with greater flexibility about how and where we work, to get the best from our workforce. As a hybrid worker, you will be expected to spend a minimum of 60% of your contractual working hours (approximately 3 days a week pro rata, (averaged over a month). Our core HQ offices are modern and newly refurbished with excellent city centre transport link and benefit from benefit from co-location with other government departments such as the Department for Health and Social Care (DHSC).
Security Clearance Level Requirement
Successful candidates must pass a disclosure and barring security check.
Successful candidates must meet the security requirements before they can be appointed. The level of security needed is Basic Personnel Security Standard Or Counter-terrorist Check (if based at the Colindale site).
For meaningful National Security Vetting checks to be carried out individuals need to have lived in the UK for a sufficient period of time. You should normally have been resident in the United Kingdom for the last 3 years as the role requires Counter Terrorism Check (CTC) clearance. UK residency less than the outlined periods may not necessarily bar you from gaining national security vetting and applicants should contact the Vacancy Holder / Recruiting Manager listed in the advert for further advice.
IMPORTANT - PLEASE READ
Artificial Intelligence (AI)
Artificial Intelligence can be a useful tool to support your application, however, all examples and statements provided must be truthful, factually accurate and taken directly from your own experience. Where plagiarism has been identified (presenting the ideas and experiences of others, or generated by artificial intelligence, as your own) applications may be withdrawn and internal candidates may be subject to disciplinary action. Please see our candidate guidance for more information on appropriate and inappropriate use.
Link below:
Artificial intelligence and recruitment | Civil Service Careers
This is a Non-Reserved post under the Civil Service Nationality Rules. To be eligible for employment in the UK Civil Service applicants must meet the Civil Service Nationality Rules (CSNRs) which operate independently of and additionally to the Immigration Rules. Applicants must also meet necessary security and vetting requirements, along with any other relevant pre-employment checks.
This job is broadly open to the following groups:
- UK nationals
- nationals of the Republic of Ireland
- nationals of Commonwealth countries who have the right to work in the UK
- nationals of the EU, Switzerland, Norway, Iceland or Liechtenstein and family members of those nationalities with settled or pre-settled status under the European Union Settlement Scheme (EUSS) (opens in a new window)
- nationals of the EU, Switzerland, Norway, Iceland or Liechtenstein and family members of those nationalities who have made a valid application for settled or pre-settled status under the European Union Settlement Scheme (EUSS)
- individuals with limited leave to remain or indefinite leave to remain who were eligible to apply for EUSS on or before 31 December 2020
- Turkish nationals, and certain family members of Turkish nationals, who have accrued the right to work in the Civil Service
For more information on job nationality requirements and the right to work in the UK, see the Civil Service Nationality rules (opens in a new window) and the UK Visas and Immigration rules (opens in a new window)
For posts on UKHSA Civil Service terms and conditions, new entrants to the Civil Service are expected to start on the minimum of the pay band. For existing Civil Servants and roles advertised across government, the rules of transfer apply, i.e., level transfers move on current salary or the pay range minimum, transfers on promotion move to new pay range minimum or receive a 10% increase. Either case is determined by whichever is the highest.
The Civil Service pay structure and progression is different from NHS Agenda for Change (AfC), most local authority pay grades and other systems that have annual pay increments. For further details, please refer to the Information Sheet- Starting Salaries & Benefits attachment.
For AfC or Medical/Dental posts, you must have the correct professional registration to be appointed. The pay will follow the AfC or Medical & Dental terms & conditions. You may be asked to provide evidence of previous service whilst we are conducting pre-employment checks to determine your starting salary.
For Temporary Appointments, if you are not currently a civil servant, you will take up the post on a Fixed Term appointment. You may be able to take this role up as a Secondment. If you are an existing Civil Servant, based outside of the UKHSA, you will take up the post as a loan which you will need your department to agree. You cannot take the post up as a fixed term. If you are an existing UKHSA member of staff, you will take up the post as either a level transfer or a temporary promotion as per the UKHSA’s Pay policy.
Given the nature of the work of the UKHSA, as a Category 1 responder under the Civil Contingencies Act, you may be required in an emergency, if deemed a necessity, to redeploy to another role at short notice. You may also be required to work at any other location, within reasonable travelling distance of your permanent home address, in line with the provisions set out in your contract of employment.
Late Applications will unfortunately not be considered.
Working for the Civil Service
We recruit by merit on the basis of fair and open competition, as outlined in the Civil Service Commission's recruitment principles (opens in a new window).
The Civil Service embraces diversity and promotes equality of opportunity. The law requires that selection for appointment to the Civil Service is on merit on the basis of fair and open competition, as outlined in the Civil Service Commission's Recruitment Principles.
If you feel your application has not been treated in accordance with the Recruitment Principles, and you wish to make a complaint, in the first instance, you should contact UKHSA Public Accountability Unit via email: [email protected] If you are not satisfied with the response you receive from the Department, you can contact the Civil Service Commission: Visit the Civil Service Commission website here.
Reserve List - If more than the required number of suitable candidates pass the interview criteria, you may be kept on a reserve list for 12 months subject to your agreement. You may be contacted, in merit-order, if similar roles with closely matching essential criteria become available and the department choose to appoint from a reserve list.
The panel will assess if candidates meet the requirement of the role first, using a specific benchmark system. If you are interviewed for the post and do not meet the required threshold for the specified grade, your application may be assessed against a similar, lower grade role and you may be offered the post should one be available.
Interview expenses will not be reimbursed.
UKHSA is required to check employment and/or education history covering three consecutive years. Please ensure you give details of at least two different referees, even if you were employed in one company for three years or more.
If you are offered a job, information will also be transferred into the national NHS Electronic Staff Records system. Please note, all communication regarding your application will be made via email, please ensure you check your junk/spam folders as emails are sometimes filtered there.
Any move to UKHSA from another employer will mean you can no longer access childcare vouchers. This includes moves between government departments. You may however be eligible for other government schemes, including Tax-Free Childcare. Determine your eligibility at https://www.childcarechoices.gov.uk/.
Benefits of working at UKHSA include:
- Generous annual leave:
-26 days for the first 5 years of continuous service
-28 days after 5 years of continuous service
-32 days after 10 years of continuous service
-Plus public holidays and one privilege day for the King’s birthday - Access to a generous Defined Benefit pension scheme with employer contributions.
- Access to a cycle-to-work salary sacrifice scheme, season ticket advances and payroll giving.
- Access to a retail discounts and cashback site.
- We also promote flexible working patterns (part-time, job-share, condensed hours). UKHSA views flexible working as essential in enabling us to recruit and retain talented people, ensuring that they are able to enjoy a long-lasting career with us. All employees have the right to apply for flexible working and there are a range of options available including working from home, compressed hours and job sharing.
- We also offer a generous maternity/ paternity and adoption leave package.
Hybrid Working
UKHSA operates a hybrid working model where business needs allow. This provides us with greater flexibility about how and where we work, to get the best from our workforce.
As a hybrid worker, you will usually spend a minimum of 60% of your contracted hours (averaged over a month) working at one of UKHSA's locations (approximately 3 days a week pro rata) and the rest of your time working from home.
Disability Confident Scheme
The Civil Service embraces diversity and promotes equal opportunities. As such, we run a Disability Confident Scheme for candidates with disabilities who meet the minimum selection criteria at sift to ensure these candidates are invited to interview. If you wish to be included in this scheme please tick the box on your application form.
Reasonable Adjustments
The Civil Service is committed to making sure that our selection methods are fair to everyone.
To help you during the recruitment process, we will take into account any reasonable adjustments that could help you.
An adjustment is a change to the recruitment process or an adjustment at work.
This is separate to the Disability Confident Scheme.
If you need an adjustment to be made at any point during the recruitment process you should:
Contact the recruitment team in confidence as soon as possible to discuss your needs.
You can find out more information about reasonable adjustments across the Civil Service here: https://www.civil-service-careers.gov.uk/reasonable-adjustments/
International Police Check
If you have spent more than 6 months abroad over the last 3 years you may need an International Police Check. This would not necessarily have to be in a single block, and could be time accrued over that period.
Internal Fraud check
If successful for this role as one aspect of pre-employment screening, applicant’s personal details – name, national insurance number and date of birth - will be checked against the Cabinet Office Internal Fraud Hub and anyone included on the database will be refused employment unless they can show exceptional circumstances. Currently this is only for External candidates to the Civil Service.
Security Vetting
Please check the Security Clearance needed for the role and follow the link for more information:
https://www.gov.uk/government/publications/united-kingdom-security-vetting-clearance-levels/national-security-vetting-clearance-levels
Future location
UKHSA is investing in a new state-of-the-art National Biosecurity Centre in Harlow, Essex, which will eventually bring together teams currently based at Canary Wharf, Colindale and Porton Down. For more details, please see: Huge biosecurity centre investment to boost pandemic protection - GOV.UK.
The new facilities will start becoming operational in the mid-2030s, with full completion by 2038. Staff will move in phases as facilities become available. If you're appointed to a role currently based at Canary Wharf, Colindale or Porton Down, please note that we'll continue investing in these sites for the next decade. As we get closer to the transition, we'll provide full information about relocation support available to staff.
Applicant requirements
Person specification
application form and supporting statement
Essential criteria
- application form and supporting statement
Essential Criteria
Essential criteria
- Questions on Knowledge, experience, skills and ability
Documents
- JD (PDF, 472.4KB)
- Civil Service Recruitment Principles (PDF, 2.6MB)
- Civil Service Nationality Rules (PDF, 195.3KB)
- Application Form Guidance Notes (PDF, 77.3KB)
- Information Sheet - Starting salaries and benefits (PDF, 129.4KB)
- Information Sheet - Selection Process (PDF, 110.1KB)
- Working at UKHSA and your benefits (PDF, 219.2KB)
Further details / informal visits contact
- Name
- Gurkamal Bhambra
- Job title
- Resourcing
- Email address
- [email protected]
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